- IAT Task
- GN Task
- PPI Task
The PubMed Central collection in XML format for the IAT task of Biocreative III is now available.
The training data for the GN task of BioCreative III are now available.
The evaluation scripts for the GN task of BioCreative III are now available (06/22/2010).
The Test data fo the GN task of BioCreative III are now available (06/28/2010).
The evaluation data (gold and silver standards) for the GN task are now available (09/29/2010).
The evaluation data (test set gold standard) for the Article Classification [Sub-]Task (ACT) of the PPI task are available.
The evaluation data (test set gold standard) for the Method Interaction [Sub-]Task (IMT) of the PPI task are available.
The test data for the Article Classification [Sub-]Task (ACT) of the PPI task are available.
The test data for the Method Interaction [Sub-]Task (IMT) of the PPI task are available.
The training data for the Method Interaction [Sub-]Task (IMT) of the PPI task are available.
The development data for the Method Interaction [Sub-]Task (IMT) of the PPI task are available.
The training data for the Article Classification [Sub-]Task (ACT) of the PPI task are available.
The development data for the Article Classification [Sub-]Task (ACT) of the PPI task are available.
IMS data from BioCreative II has been added as an additional resource for the Method Interaction [Sub-]Task (IMT) of the PPI task. The package includes 1051 annotated articles, with the HTML format in addition to PDF, PubMed XML and plain text.
The evaluation library and command-line tool (from BioCreative II.5) for the PPI tasks can be found here.