Co-located: BioCreative V.5 Challenge Evaluation Workshop
and ELIXIR-EXCELERATE Workshop Text-mining infrastructure requirements
Table of Contents: BC V.5 - Workshop Proceedings
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The BioCreative V.5 evaluation workshop: tasks, organization, sessions and topics
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Krallinger et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 8-10
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Evaluation of chemical and gene/protein entity recognition systems at BioCreative V.5: the CEMP and GPRO patents tracks.
Pérez-Pérez et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 11-18
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Benchmarking biomedical text mining web servers at BioCreative V.5: the technical Interoperability and Performance of annotation Servers - TIPS track .
Pérez-Pérez et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 19-27
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DUTIR at the BioCreative V.5.BeCalm Tasks: A BLSTM-CRF Approach for Biomedical Entity Recognition in Patents.
Luo et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 28-39
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HITextracter System for Chemical and Gene/Protein Entity Mention Recognition in Patents.
Liu et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 40-46
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CRFVoter: Chemical Entity Mention, Gene and Protein Related Object recognition using a conglomerate of CRF based tools.
Liu et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 47-53
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Neji: Recognition of Chemical and Gene Mentions in Patent Texts.
Santos and Matos.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 54-60
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Chemlistem - chemical named entity recognition using recurrent neural networks.
Corbett and Boyle.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 61-68
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Recognition of Chemical Entity Mention in Patents Using Feature-rich CRF.
Guo et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 69-72
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Towards Robust Chemical Recognition with TaggerOne at the BioCreative V.5 CEMP Task.
Leaman and Lu.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 73-80
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A hybrid text mining system for chemical entity recognition and classification using dictionary look-up and pattern matching @ BeCalm challenge evaluation workshop.
Raja et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 81-88
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IBEnt: Chemical Entity Mentions in Patents using ChEBI.
Lamurias et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 89-95
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ChemGrab: Identification of Chemical Names Using a Combined Negative-Dictionary and Rule-Based Approach.
Sharma and Sarkar.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 96-103
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Combining the BANNER tool with the DINTO ontology for the CEMP task of BioCreative V.5.
Colon-Ruiz et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 104-107
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An Ensemble Algorithm for Sequential Labelling: A Case Study in Chemical Named Entity Recognition.
Wang et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 108-114
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Statistical Principle-based Approach for Gene and Protein Related Object Recognition.
Lai et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 115-121
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Tagger: BeCalm API for rapid named entity recognition.
Jensen.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 122-129
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MER: a Minimal Named-Entity Recognition Tagger and Annotation Server.
Couto et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 130-137
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SIA: Scalable Interoperable Annotation Server.
Kirschnick and Thomas.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 138-145
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High-throughput, interoperability and benchmarking of text-mining with BeCalm biomedical metaserver.
Madrid and Valencia.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 146-155
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Performance and interoperability assessment of Disease Extract Annotation Server (DEAS).
Jonnagaddala et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 156-162
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TextImager as an interface to BeCalm.
Hemati et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 163-166
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Olelo’s named-entity recognition web service in the BeCalm TIPS task.
Folkerts and Neves.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 167-174
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OGER: OntoGene’s Entity Recogniser in the BeCalm TIPS Task.
Furrer and Rinaldi.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 175-182
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READ-Biomed-Server: A Scalable Annotation Server Using the UIMA Concept Mapper.
Teng and Verspoor.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 183-190
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Neji: DIY web services for biomedical concept recognition.
Santos and Matos.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 191-195
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NTTMU-SCHEMA BeCalm API in BioCreative V.5.
Dai et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 196-204
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Micro-RNA Recognition in Patents in BioCreative V.5.
Wang et al.
Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, 205-209
